Plasmopara sp.

Peptides database


 morestill running ...


  1. Fasta to Xml conversion TODO

  2. InterPro analyses on peptides TODO

  3. peptides automatic annotation from InterPro analyses TODO

  4. peptides annotated fasta conversion TODO

  5. peptides annotated databank creation TODO

  6. clusters automatic annotation from InterPro analyses TODO

  7. clusters annotated fasta conversion TODO

  8. clusters annotated databank creation TODO

  9. Split fasta db files TODO

  10. Add read members to clusters XML files TODO

  11. clusters ncbi-blastn Plasmopara sp. Clusters database ncbi-blastn analyses TODO

  12. clusters wu-blastn Aphanomyces DB EST TODO

  13. clusters wu-blastn Helianthus + Plasmopara 2009 project clusters TODO

  14. clusters wu-blastn Helianthus annuus transcriptome 2011 clusters TODO

  15. clusters wu-blastn Hyaloperonospora arabidopsidis v.8.3.2 gene models TODO

  16. clusters wu-blastn Heliagene Clusters TODO

  17. clusters wu-blastn NCBI NucEST Oomycetes sequences release 20111214 TODO

  18. clusters wu-blastn Phytophthora ramorum release 1_1 transcripts TODO

  19. clusters wu-blastn Phytophthora sojae release 1_1 transcripts TODO

  20. clusters wu-blastn Phytophthora infestans transcripts TODO

  21. clusters wu-blastn Plasmopara hastedii clusters TODO

  22. clusters wu-blastn Plasmopara viticola clusters TODO

  23. clusters wu-blastn Pythium ultimum transcripts TODO

  24. clusters ncbi-blastx PubMed proteins (TrEMBL subset, release 2111214) TODO

  25. clusters ncbi-blastx Swiss-Prot database release 2111214 TODO

  26. clusters ncbi-blastx Arabidopsis thaliana proteome TAIR10 TODO

  27. clusters ncbi-blastx Vitis vinifera proteome TODO

  28. clusters ncbi-blastx UniProt Bacteria proteins (2011_11) TODO

  29. clusters ncbi-blastx UniProt Fungi proteins (2011_11) TODO

  30. clusters ncbi-blastx UniProt Virus proteins (2011_11) TODO

  31. clusters wu-blastn Albugo candida release 20111216 transcripts TODO

  32. Merge clusters analyses results in a single synthetic xml file TODO

  33. Create clusters lucene subdir indices TODO

  34. Create clusters lucene merge index TODO

  35. Create clusters analyses raw results BerkeleyDB TODO

  36. peptides ncbi-blastp Plasmopara sp. Peptides database ncbi-blastp analyses TODO

  37. peptides ncbi-tblastn Aphanomyces DB EST TODO

  38. peptides ncbi-blastp Helianthus + Plasmopara 2009 project peptides TODO

  39. peptides ncbi-blastp Helianthus annuus transcriptome 2011 peptides TODO

  40. peptides ncbi-blastp Hyaloperonospora arabidopsidis v.8.3.2 peptides TODO

  41. peptides ncbi-blastp HeliaGene Peptides TODO

  42. peptides ncbi-tblastn NCBI NucEST Oomycetes sequences release 20111214 TODO

  43. peptides ncbi-blastp Phytophthora ramorum release 1_1 peptides TODO

  44. peptides ncbi-blastp Phytophthora sojae release 1_1 peptides TODO

  45. peptides ncbi-blastp Phytophthora infestans peptides TODO

  46. peptides ncbi-blastp Plasmopara hastedii peptides TODO

  47. peptides ncbi-blastp Plasmopara viticola peptides TODO

  48. peptides ncbi-blastp Pythium ultimum peptides TODO

  49. peptides ncbi-blastp PubMed proteins (TrEMBL subset, release 2111214) TODO

  50. peptides ncbi-blastp Swiss-Prot database release 2111214 TODO

  51. peptides ncbi-blastp Arabidopsis thaliana proteome TAIR10 TODO

  52. peptides ncbi-blastp Vitis vinifera proteome TODO

  53. peptides ncbi-blastp UniProt Bacteria proteins (2011_11) TODO

  54. peptides ncbi-blastp UniProt Fungi proteins (2011_11) TODO

  55. peptides ncbi-blastp UniProt Virus proteins (2011_11) TODO

  56. peptides ncbi-blastp Albugo candida release 20111216 peptides TODO

  57. Merge peptides analyses results in a single synthetic xml file TODO

  58. Create peptides lucene subdir indices TODO

  59. Create peptides lucene merge index TODO

  60. Create peptides analyses raw results BerkeleyDB TODO

  61. Create FrameD pictures BerkeleyDB TODO

Clusters database


 morestill running ...


  1. Fasta to Xml conversion TODO

  2. InterPro analyses on peptides TODO

  3. peptides automatic annotation from InterPro analyses TODO

  4. peptides annotated fasta conversion TODO

  5. peptides annotated databank creation TODO

  6. clusters automatic annotation from InterPro analyses TODO

  7. clusters annotated fasta conversion TODO

  8. clusters annotated databank creation TODO

  9. Split fasta db files TODO

  10. Add read members to clusters XML files TODO

  11. clusters ncbi-blastn Plasmopara sp. Clusters database ncbi-blastn analyses TODO

  12. clusters wu-blastn Aphanomyces DB EST TODO

  13. clusters wu-blastn Helianthus + Plasmopara 2009 project clusters TODO

  14. clusters wu-blastn Helianthus annuus transcriptome 2011 clusters TODO

  15. clusters wu-blastn Hyaloperonospora arabidopsidis v.8.3.2 gene models TODO

  16. clusters wu-blastn Heliagene Clusters TODO

  17. clusters wu-blastn NCBI NucEST Oomycetes sequences release 20111214 TODO

  18. clusters wu-blastn Phytophthora ramorum release 1_1 transcripts TODO

  19. clusters wu-blastn Phytophthora sojae release 1_1 transcripts TODO

  20. clusters wu-blastn Phytophthora infestans transcripts TODO

  21. clusters wu-blastn Plasmopara hastedii clusters TODO

  22. clusters wu-blastn Plasmopara viticola clusters TODO

  23. clusters wu-blastn Pythium ultimum transcripts TODO

  24. clusters ncbi-blastx PubMed proteins (TrEMBL subset, release 2111214) TODO

  25. clusters ncbi-blastx Swiss-Prot database release 2111214 TODO

  26. clusters ncbi-blastx Arabidopsis thaliana proteome TAIR10 TODO

  27. clusters ncbi-blastx Vitis vinifera proteome TODO

  28. clusters ncbi-blastx UniProt Bacteria proteins (2011_11) TODO

  29. clusters ncbi-blastx UniProt Fungi proteins (2011_11) TODO

  30. clusters ncbi-blastx UniProt Virus proteins (2011_11) TODO

  31. clusters wu-blastn Albugo candida release 20111216 transcripts TODO

  32. Merge clusters analyses results in a single synthetic xml file TODO

  33. Create clusters lucene subdir indices TODO

  34. Create clusters lucene merge index TODO

  35. Create clusters analyses raw results BerkeleyDB TODO

  36. peptides ncbi-blastp Plasmopara sp. Peptides database ncbi-blastp analyses TODO

  37. peptides ncbi-tblastn Aphanomyces DB EST TODO

  38. peptides ncbi-blastp Helianthus + Plasmopara 2009 project peptides TODO

  39. peptides ncbi-blastp Helianthus annuus transcriptome 2011 peptides TODO

  40. peptides ncbi-blastp Hyaloperonospora arabidopsidis v.8.3.2 peptides TODO

  41. peptides ncbi-blastp HeliaGene Peptides TODO

  42. peptides ncbi-tblastn NCBI NucEST Oomycetes sequences release 20111214 TODO

  43. peptides ncbi-blastp Phytophthora ramorum release 1_1 peptides TODO

  44. peptides ncbi-blastp Phytophthora sojae release 1_1 peptides TODO

  45. peptides ncbi-blastp Phytophthora infestans peptides TODO

  46. peptides ncbi-blastp Plasmopara hastedii peptides TODO

  47. peptides ncbi-blastp Plasmopara viticola peptides TODO

  48. peptides ncbi-blastp Pythium ultimum peptides TODO

  49. peptides ncbi-blastp PubMed proteins (TrEMBL subset, release 2111214) TODO

  50. peptides ncbi-blastp Swiss-Prot database release 2111214 TODO

  51. peptides ncbi-blastp Arabidopsis thaliana proteome TAIR10 TODO

  52. peptides ncbi-blastp Vitis vinifera proteome TODO

  53. peptides ncbi-blastp UniProt Bacteria proteins (2011_11) TODO

  54. peptides ncbi-blastp UniProt Fungi proteins (2011_11) TODO

  55. peptides ncbi-blastp UniProt Virus proteins (2011_11) TODO

  56. peptides ncbi-blastp Albugo candida release 20111216 peptides TODO

  57. Merge peptides analyses results in a single synthetic xml file TODO

  58. Create peptides lucene subdir indices TODO

  59. Create peptides lucene merge index TODO

  60. Create peptides analyses raw results BerkeleyDB TODO

  61. Create FrameD pictures BerkeleyDB TODO