Some tips:
Field | Description | Data type |
---|---|---|
accession | Accession code [HaT13l followed by 6 digits for clusters (and by _ + one digit and _AA suffix for peptides)] | alpha-numeric |
definition_id | Type of definition content e.g.:raw, family | alphabetic |
fragment | Framedp partial prediction | alpha-numeric |
go | Gene ontoly term or accession (e.g.:GO:0005524, "protein amino acid phosphorylation") | |
hit_accession | Accession code of an analysis hit (based on blast, iprscan) e.g.: Q80ZN9, PF00107 | alpha-numeric |
hit_bank | Search for a cluster which have a blast hit against this database | alpha-numeric |
hit_definition | Definition/product of an analysis hit (based on blast, iprscan) | alpha-numeric |
hit_id | Id code of an analysis hit (based on blast, iprscan) e.g.: CX6B2_MOUSE, PF00107 | alpha-numeric |
interpro | InterPro accession (e.g.:IPR008271) | |
length | Sequence length | numeric |
link_accession | Crosslinked object accession (cluster accession, peptide accession, read accession) | alpha-numeric |
link_type | Type of cross link (between clusters, peptides, reads) | alphabetic |
product | Definition/product based on InterPro automatic annotation | alpha-numeric |
sequence | Sequence | alphabetic |